The manner in which the sparse matrix grows is predictable: all distances, but many of them will be discarded at each stage,Ĭontrolling the total memory required. txt - output listeria_1 - threads 16 - update - db
txt - output listeria_1 - threads 16 - update - db poppunk_assign - ref - db listeria_1 - q - files qfile3. txt - output listeria_1 poppunk - fit - model lineage - ref - db listeria_1 - ranks 500 - threads 16 poppunk_assign - ref - db listeria_1 - q - files qfile2. Poppunk - create - db - r - files qfile1.
